Here is a low cost option to the Comic Cubes, Comic Drawers. These are like your traditional cardboard comic boxes, but have a slide out drawer with built-in dividers. Looks like the closest place that stocks these is:
Fantasy Books
1113 E. Main Ave.
Belleville, IL 62220
618.235.0844
They cost about $10 each, which isn’t bad considering a standard long comic box is about $6. Shipping can be a bit expensive if you have to mail order them.
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I am considering ordering some of these for my comics I plan on keeping.